Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq1343 141 8e-32 >seq1343 Length=5826 Score = 141 bits (156), Expect = 8e-32 Identities = 130/162 (80%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGG-GATTAGCTCCCCCTCGC 59 |||||||||||| | ||||||| ||| ||| ||| ||| ||||||||| |||||| Sbjct 1416 TCGAGTTGCAGAGTGCAATCCGAACTGAGATGG--TTTTTGGAGATTAGCTCGACCTCGC 1359 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | | || |||| |||| ||||||||| ||||||| ||||| ||| |||||||| Sbjct 1358 GATCTCGCTGCCCACTGTCACCACCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCC 1299 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||||||||||||||| | || |||| Sbjct 1298 ATGAGGACTTGACGTCATCCCCACCTTCCTCCAGCTTATCAC 1257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415993705140