Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1343 271 1e-70 >seq1343 Length=5826 Score = 271 bits (300), Expect = 1e-70 Identities = 216/260 (83%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 ||||||||||||||||| ||||| ||| | ||||| | | ||||||| |||||| Sbjct 5007 GCTTAGATGCCTTCAGCGGTTATCTAGTCCGTATATAGCTACTCTGCTATGCCGTTGGCA 4948 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| | | |||||||| | |||||||||||||||||||||||| |||||| |||| Sbjct 4947 CGACAACAGATCCACCAGAGATACGTCCATCCCGGTCCTCTCGTACTAGGGACAGATCCT 4888 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||| ||||||| |||||| | |||||||||||||||||||| ||||||||||||||| Sbjct 4887 TTCAATATTCCTACACCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTGAACCC 4828 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 | ||| ||| || |||||| ||||||||||| ||||||||||||| || ||||||||| Sbjct 4827 AACTCACGTACCGCTTTAAATGGCGAACAGCCATACCCTTGGGACCTGCTCCAGCCCCAG 4768 Query 256 GATGAGACGAGCCGACATCG 275 |||| || ||| |||||||| Sbjct 4767 GATGCGATGAGTCGACATCG 4748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780788185032