Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1097 131 3e-28 seq1411 114 2e-23 >seq1097 Length=130645 Score = 131 bits (144), Expect = 3e-28 Identities = 134/175 (77%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 |||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||| Sbjct 130193 GCAATAACAGGTCTATGATGCCCTTGGATGTTCGGGGCTGCACGCGCGCTACACTGAAGA 130252 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | ||||| || | || | || ||| | ||||||| | | ||| | ||||| Sbjct 130253 AATCAACGTGTACGCGTCCATTTTCGAGAGGAATTGGTAATCCTTTGAAAACTTTTCGTG 130312 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 || ||||||| | ||||| |||||| | ||| |||||| ||| ||||||||| || Sbjct 130313 CTTGGGATAGTGAATTGCTATTATTTCACTTAAACGAGAAATTCCTAGTAAGTGC 130367 >seq1411 Length=104887 Score = 114 bits (126), Expect = 2e-23 Identities = 161/227 (71%), Gaps = 17/227 (7%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGAT-----------GTTCTGGGCCGCACGCGCGC 162 || ||||||| ||||||||||||||| || |||| || | |||| ||| | Sbjct 98709 GCCATAACAGATCTGTGATGCCCTTAAATATGTTCGGGTTGTTCGGGACTGCACACGCAC 98650 Query 163 TACACTGACAGAGCCAACGAGTTCAT---CACCTTGGCCGGAAGGTCTGGGTAATCTTGT 219 |||||||| | || ||||| | | ||| || || ||| | ||||||| | | Sbjct 98649 TACACTGAAAACATCAGCGAGTACGTTTCCACTTT---CGAGAGGAGTTGGTAATCCTTT 98593 Query 220 TAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCT 279 ||| | ||||||| || ||| | ||||| || ||| | ||| ||||| |||| ||| Sbjct 98592 GAAAACTTTTCGTGCTTGGAGTAGTGAATTGCTATCATTTCACTTAAACGAAGAATTCCT 98533 Query 280 AGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 |||||| || ||||| | | ||||||||||| |||||||| ||||| Sbjct 98532 AGTAAGTGCAAGTCATTAACTCGCGTTGATTATGTCCCTGCACTTTG 98486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947185204736