Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1343 266 1e-68 >seq1343 Length=5826 Score = 266 bits (294), Expect = 1e-68 Identities = 357/484 (74%), Gaps = 12/484 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| |||||||||| |||| | || ||||||||||||| ||||||||| |||| Sbjct 3010 CGAGTCTGAACAGGGCGTTCAGTTCGTCGGATTAGACCCGAAACCGAGTGATCTAGCCAT 3069 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| |||||||| ||||||| ||||||||| ||||| || | Sbjct 3070 GAGCAGGTTGAAGGTTGGGTAACACCAACTGGAGGACCGAACCCATATCTGTTGCAATAG 3129 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||| ||||| |||||||||||||| || |||||| ||| ||||||||||||| Sbjct 3130 ATTGGGATGACTTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGTTCTC 3189 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAG-TATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| |||||||||||| || || || | ||| ||||||||||||||| ||| Sbjct 3190 CGCGAAATCTATTTAGGTAGAGCGTCGAGCGAATACCTCAGGGGGTAGAGCACTG-AATG 3248 Query 240 GCT-AGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAATGCGCATCAGTTTT 297 | | | |||| | || ||||| | | || | |||||||||||| | ||| | Sbjct 3249 GGTAATGGGGACTCACCGTCTTACTGATCTCAAT-CAAACTCCGAATACCTGAGAGTACT 3307 Query 298 AC-CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 || || || | ||| ||||||||| |||||| ||||| || || || ||| Sbjct 3308 ACTCGGCAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGCAACAACCCTGAC 3365 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | || |||||| ||| || | | ||||||| | || || || | | | || || Sbjct 3366 CACCATCTAAGGTCCCTAAGTTATGGCTAAGTGGGA--AAGGATGTGAGGATCCCAAAAC 3423 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 | | ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| || Sbjct 3424 AACCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAACAGCTCACTGGT 3482 Query 477 CGAG 480 | || Sbjct 3483 CTAG 3486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689573608448