Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1150 156 1e-35 seq1461 131 5e-28 seq1538 122 3e-25 seq1473 113 1e-22 seq951 107 6e-21 seq755 102 2e-19 seq1424 87.8 5e-15 seq182 86.0 2e-14 seq1282 84.2 7e-14 seq1383 78.8 3e-12 >seq1150 Length=1226963 Score = 156 bits (172), Expect = 1e-35 Identities = 139/170 (82%), Gaps = 8/170 (5%) Strand=Plus/Plus Query 76 GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCT 135 ||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 790068 GGGTAATTTTCGCGCCTGCTGCCTTCCTTCGATGTGGTAGCCGTTTCT-AGGCTCCCTCT 790126 Query 136 CCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACC 195 ||||| || |||| |||||| |||| |||||| |||||||| | | | || | ||| Sbjct 790127 CCGGAGTCAAACCTTAATTCTCCGTCACCCGTCACCACCATGGTTGTCAAATACACGACC 790186 Query 196 ATCGAAAGTTGATAGGGCAGAAATTTGAATGAAC-CATCGCCGGCTCAAG 244 |||||||||||||||||| ||| || ||| |||||||| |||| Sbjct 790187 -----AAGTTGATAGGGCAGAAACTTG-ATAAACGTATCGCCGGAACAAG 790230 >seq1461 Length=78882 Score = 131 bits (144), Expect = 5e-28 Identities = 98/114 (86%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 108 |||||| | || || || || | |||||||||| ||||||||||||||||||||||| Sbjct 8668 TTGTCAATGCCCCCTCGAACCGAAAATGGGTAATTTTCGCGCCTGCTGCCTTCCTTGGAT 8727 Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||||||||||||||| ||||||||||||| || ||||||||| ||||||| Sbjct 8728 GTGGTAGCCGTTTCTCAGACTCCCTCTCCGGAGTCAAACCCTAAT--CCCGTTA 8779 >seq1538 Length=573084 Score = 122 bits (134), Expect = 3e-25 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | |||||||| ||| || | || |||||||||| |||| ||||||||||| Sbjct 183314 TATTTTTCGTCACTACATCCTCGAACTGAGAGTGGGTAATTTTAGCGCTTGCTGCCTTCC 183255 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||| ||||||||||| |||||| |||| | ||||| || || ||| |||||| Sbjct 183254 TTGGATGTGATAGCCGTTTCTTAGGCTCTCTCTGCAGAATCAAAGTCTGCTTCTCCGTTA 183195 Query 163 CCCGTTGATACCATGGT 179 ||||| |||||||| Sbjct 183194 CCCGTCATCACCATGGT 183178 >seq1473 Length=166235 Score = 113 bits (124), Expect = 1e-22 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 42 GTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTC 101 |||||| | || ||||||| | || | || ||| |||||| |||||||||| |||| Sbjct 1123 GTATTTTTCGTTACTACCTTCTCGAACTGAGAGTGGCTAATTTTAGCGCCTGCTGTCTTC 1064 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151 |||||||||||||||||||||||||||||||| |||||| || |||| || Sbjct 1063 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTTTCCGGAGTCAAACCGTA 1014 >seq951 Length=141373 Score = 107 bits (118), Expect = 6e-21 Identities = 149/202 (74%), Gaps = 10/202 (5%) Strand=Plus/Minus Query 86 CGCGCCTGCTGCCT----TCCTTGGATGTGGTAGCCGTTTCTC-AGGCTCCCT--CTCCG 138 |||||||||||||| |||||||| |||||||||||||||| || | | | ||| | Sbjct 72689 CGCGCCTGCTGCCTGCCTTCCTTGGAAGTGGTAGCCGTTTCTCGAGCCGCTGTAACTCAG 72630 Query 139 GAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATC 198 | || |||| |||||| |||| || ||| | | ||| | | | || | |||||| Sbjct 72629 AATTCAAACCTTAATTCTCCGTCACTCGTCACTTA-ACGGTTGTCAAATACACAACCATC 72571 Query 199 GAAAGTTGATAGGGCAGAAATTTGAATGAAC-CATCGCCGGCTCAAGGCCATGCGATTCG 257 |||||| |||||||||||| || || ||| |||||||| |||| |||| ||||| Sbjct 72570 AAAAGTTCATAGGGCAGAAACTT-CATAAACGTATCGCCGGAACAAGTCCATTCGATTAA 72512 Query 258 TTAAGTTATTATGAATCACCAA 279 | | |||| || || ||||||| Sbjct 72511 TAACGTTACTAAGAGTCACCAA 72490 >seq755 Length=55447 Score = 102 bits (112), Expect = 2e-19 Identities = 80/96 (83%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 72 GATTGGGTAATTTGCGCGCCTGCTG-----CCTTCCTTGGATGTGGTAGCCGTTTCTCAG 126 || |||||||||| |||||||||| ||||| |||| ||||||||||||||||| Sbjct 20378 GAGTGGGTAATTTTTGCGCCTGCTGTCTTGCCTTCTTTGGCTGTGGTAGCCGTTTCTCTC 20437 Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||||||||||| || ||||||| ||| |||||| Sbjct 20438 GCTCCCTCTCCGGAGTCAAACCCTATTTCTCCGTTA 20473 >seq1424 Length=33004 Score = 87.8 bits (96), Expect = 5e-15 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 111 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA 170 ||||||||||| ||||| | ||||||||| ||||||||| |||| ||||||||||| Sbjct 15053 GGTAGCCGTTTTTCAGGTTTTCTCTCCGGAGTCGAACCCTGATTCTCCGTTACCCGTCAT 15112 Query 171 TACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223 |||||| | | | | | | || ||| |||||| ||||| | |||||||| Sbjct 15113 CACCATGATTGTCAAACACGCAACTATCAAAAGTTAATAGGACGAAAATTTGA 15165 >seq182 Length=51005 Score = 86.0 bits (94), Expect = 2e-14 Identities = 91/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| ||||||||| || | |||| | | || || | |||| | |||||||||| Sbjct 40992 GTACCCATTCCAATAACTGTTCGCAAA-GCGACCAGTCTTGTCATTTTTCGTCACTACCT 41050 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 || || | || |||||||||| ||||||||||||||| ||||| |||||||||||| Sbjct 41051 CCTCGAACTGAGAGTGGGTAATTTTCGCGCCTGCTGCCTTTCTTGGGTGTGGTAGCCGT 41109 >seq1282 Length=265974 Score = 84.2 bits (92), Expect = 7e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 |||||||||||| || | || |||||||||| ||||||||||||||||||||||| | Sbjct 172117 GTCACTACCTCCTCGAACTGAGAATGGGTAATTTTCGCGCCTGCTGCCTTCCTTGGATTT 172176 Query 111 GGTAGCCGT 119 ||||||||| Sbjct 172177 GGTAGCCGT 172185 >seq1383 Length=178091 Score = 78.8 bits (86), Expect = 3e-12 Identities = 111/152 (73%), Gaps = 8/152 (5%) Strand=Plus/Minus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG---TAAGGTACTATCAAATAA 401 ||||||||||| ||| |||| |||| ||||||||| || | | | | | | ||| Sbjct 91121 CATGTATTAGCGCTATAATTCCCACAGTTATCCATTTAAAGTTTTGCTTCGTTTAGTTAA 91062 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGA 460 | || ||| | |||||| | ||||| ||| ||| | |||| | ||| |||||| Sbjct 91061 AT-ATCGCTGTTGTAATGAACTGTTCGCGGTTCTACTTT---GATTCGTTTAAACTTAGG 91006 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATAT 492 ||||||||||||||||||||||| || | ||| Sbjct 91005 CATGCATGGCTTAATCTTTGAGATAAACGTAT 90974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510376407552