Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq928 100 1e-15 >seq928 Length=29768 Score = 100 bits (110), Expect = 1e-15 Identities = 124/169 (73%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161 ||||||| ||||| || |||||||||||||| ||| || || | || || | || || Sbjct 767 TCTCGTCGCCGTCGAAATCGGCGTTGTAGGGTGTGGTTACGGAGAGATTCATTCGGAAGG 826 Query 351162 TGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGG 351221 | | || ||| | | || |||||| |||| |||||| ||||||||||||| Sbjct 827 TCGA---CCAGGGGAGAATCTTGACTCGGTGCCCCATCATGGACATCTTGTGGAGCGTGG 883 Query 351222 GCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCAC 351270 | || || ||| || |||||||||||| ||||||| ||| | |||||| Sbjct 884 GTTGACGGTTGAAGACGATGATGTCGCCGTCGCGCATGTGGCGCTCCAC 932 Score = 91.5 bits (100), Expect = 6e-13 Identities = 122/169 (72%), Gaps = 3/169 (2%) Strand=Plus/Minus Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161 ||||||| ||||| || ||||||||||||||| ||| || || | || || | | || Sbjct 27429 TCTCGTCGCCGTCGAAATCGGCGTTGTAGGGCGTGGTTACGGAGAGATTCATCCGAAAGG 27370 Query 351162 TGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGG 351221 || | || ||| | | || | |||| |||| |||||| ||||||||||| | Sbjct 27369 TGGA---CCAGGGGAGAATCTTGACTCTGTGCCCCATCATGGACATCTTGTGGAGCGTAG 27313 Query 351222 GCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCAC 351270 | || || ||| || ||| |||||||| ||||||| ||| | |||||| Sbjct 27312 GTTGACGGTTGAAGACGATTATGTCGCCGTCGCGCATGTGGCGCTCCAC 27264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084696460240476