Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq277 86.0 2e-11 >seq277 Length=1171 Score = 86.0 bits (94), Expect = 2e-11 Identities = 126/176 (72%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 364395 CCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAG 364454 |||||||||| ||| || | | ||||||||||||||||||||| | || | | | Sbjct 256 CCTTGGAGGCA-----CTCGATCAAGTGACCAATAGTCATACGAGAGGGGACGGCGTGGG 310 Query 364455 GGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCGGGA-GGA 364513 |||| || |||| ||| || || || ||| || |||||||| ||||| || || Sbjct 311 GGTTAATAATGACGTCGGGAGACAGTCCTTCACAAGTGAAGGGCATGTCTTCTTGACGGT 370 Query 364514 ACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 || |||| || || |||||||| || | | || ||||| || ||||| ||||| Sbjct 371 AC-ATGATCCCCATAGTTCCCTTCTGTCCGTGTCGCGAAGCGAATTTGTCACCAAT 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884848677532866