Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq5552 455 7e-126 >seq5552 Length=4920 Score = 455 bits (504), Expect = 7e-126 Identities = 337/375 (90%), Gaps = 14/375 (4%) Strand=Plus/Minus Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60 |||||||||| ||| |||| |||||||||||| ||||||||||||||| ||| |||||| Sbjct 4573 GCGACGTAGA-TGT-CGTT-CGGCAGGTCTTT-GCCAGCCGGAATCTT-GCT-GTAGCT- 4521 Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120 |||| |||||||||||||||||||| ||||| |||| | |||||||||||||||||||| Sbjct 4520 CATT-GGGCGTTGCCCCCGTTAATT-GGCCATTAAACAT-GGCCGGATTGGCCTAAAAGT 4464 Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCGATGCCATTGCGCCAGAACGTCGTACGGTC 180 |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||| Sbjct 4463 -GGCGGCGATTATAGGCACATTCTGACGCCGATGCCAT-GCGCCAGA-CGTCGTACGGTC 4407 Query 181 ATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTTGCAGTTGGTGCAGGCGGGCCAGG 240 ||||||||| | ||||| || |||||||||||||||||||||||| ||||||||||| Sbjct 4406 ATTCGTCTT-GTGGCTGGTAGCGCGGGTCGCTGGCTTGCAGTTGGGTGAGGCGGGCCAGC 4348 Query 241 GTGTCCTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTGTGGATAACGATTGACCAGT 300 | ||||||||||| |||||||||||||| ||||||||||| ||||| | ||||||| Sbjct 4347 GGATCCTGGCGATAGAAGCGGCTGAGTTGCGCGTACACCTGGGGATAGTGGCTGACCAGC 4288 Query 301 AAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCCGGGTTTTCG 360 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct 4287 AAATCCGGGGCGCTGAAAAAATATTCGCTGGTGACGGCAAAGAATTCAGCCGGGTTTTCG 4228 Query 361 GCGGCGTAGGGGTCG 375 ||||||||||||||| Sbjct 4227 GCGGCGTAGGGGTCG 4213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097535966016