Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq5411 93.3 2e-16 >seq5411 Length=636 Score = 93.3 bits (102), Expect = 2e-16 Identities = 135/189 (71%), Gaps = 10/189 (5%) Strand=Plus/Minus Query 200 TCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATG 259 ||||| ||| ||| |||| || | | | ||||||| ||||||||| | ||||| Sbjct 196 TCCAGTTCAAGGATGCGGGTCGCCAGGTTTTGCAGGAAGGAACGGTCGTGCG---TGATG 140 Query 260 ATCATCAGG-----CTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGA 314 | || || | |||||| | | ||| | |||||||||| || | | || Sbjct 139 AACAGCACGGCGCCCTGGAATTCCTTG--AGGGCCTCTTCCAGCCAGGCAATCGCGCCGA 82 Query 315 TGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCT 374 |||||||||||||||| ||||||||||||| |||| || || ||||| | ||| |||| Sbjct 81 TGTCCAAGTGGTTGGTGGGTTCGTCGAGCAGTAGCAGATCCGGCTCGGACACCAGGGCCT 22 Query 375 GGGCCAGCA 383 ||||||||| Sbjct 21 GGGCCAGCA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881486797064