Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= AAMG01001581.1 Length=660 Score E Sequences producing significant alignments: (Bits) Value seq5226 223 1e-55 >seq5226 Length=3224 Score = 223 bits (246), Expect = 1e-55 Identities = 300/413 (73%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 239 CCACGGCTTGAGCCAAAGCCCCAACCCCACCAACACCAGCGCGCCGGCCAGGCTACTCAA 298 ||||||||| ||||| ||||||| |||| |||||||| |||||||||||| | || | Sbjct 365 CCACGGCTTCAGCCACAGCCCCATGCCCAGCAACACCACGGCGCCGGCCAGGGTGCTTAG 424 Query 299 CCCCAACTGCCACCCATCGTTGTGCAAGGGGTGCAGGGCCAGCGCCGCCACACCCAACAG 358 ||||| ||| || ||| | | | ||| |||| ||||||||| |||| ||| Sbjct 425 CCCCAGTTGCAGCCACACGTCTTCAATCCGAAACAGCGCCAACGCCGCCACGCCCATCAG 484 Query 359 CACCCCGCTCAAGCCCCACTGCAATGGCCAGCCCAGTTGGCCGAGCAGTTGCGGGCGGTG 418 || |||| | ||| | | | |||| ||| |||||||| | |||| || Sbjct 485 CAGGGCGCTGAGCAGCCAGTTCCGCGCCCAGGGCAGGGCGCCGAGCAAGGCCTGGCGTTG 544 Query 419 CATCAGCAACAAGTTCGTCACCACGACGCCACCCAACGCCGCCAAGGCGATCCCCGGCAG 478 |||||||| || || | || || ||| |||||||| | |||||||| ||| Sbjct 545 CATCAGCAGCAGCGCGGTGCAGATCACCCCGGCCAGTGCCGCCAACGGGATCCCCGACAG 604 Query 479 GCCGAT-ACAATAGGGCAGCACCACCAGCAAGGCGGCG--TTGACCAGGCTGCCCAGCAG 535 ||||| |||| | |||||||| | |||| || || |||||||||||||| ||||| Sbjct 605 GCCGAACACAA-ACGGCAGCACACCGAGCA--GCAGCAAATTGACCAGGCTGCCGAGCAG 661 Query 536 TTCGCAATTGAGCGGCAGGCGCGTGTCGCCGCTGGCATAGGCATAGCGAGCGAGCATCGC 595 |||||| || ||| |||||||||| ||| || ||||||||||| ||||||| || Sbjct 662 TTCGCAGCGCAGTGGCTGGCGCGTGTCCCCGGCCGCGTAGGCATAGCGCGCGAGCAAAGC 721 Query 596 GTTCCAGGCGCCAAACACCAGAGGCGTGGCGAACCAGGCCAGCAGCGCCGGCA 648 |||||||||||||| ||||| ||| ||| ||||||||||||||| ||||| Sbjct 722 ATTCCAGGCGCCAAATACCAGCGGCACGGCAAACCAGGCCAGCAGCAGCGGCA 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2006279288706