Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= AAMG01001951.1 Length=416 Score E Sequences producing significant alignments: (Bits) Value seq5088 179 9e-43 >seq5088 Length=2479 Score = 179 bits (198), Expect = 9e-43 Identities = 291/413 (70%), Gaps = 8/413 (2%) Strand=Plus/Plus Query 2 CCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCG-ACA 60 ||| || ||||||||| ||| | | | |||||||||||| |||| | || | | | Sbjct 224 CCACCCGAACGCCATGTCCCTGCACGCCTACGGCGAAAACGGCCTGCTG-AGCGAGCAAA 282 Query 61 CCTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCA---GGCCCAAAGCGGTG 117 |||||||||| | || ||||||||| | | || | || | |||| || || Sbjct 283 CCTATTACTCCATAGGCGGCGGTTTCATCATCGAAGCGGCGGAAGCGGCCTCGGGCATTG 342 Query 118 TGGCGGACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGC 177 | || || || || || ||||||| || |||||||| ||||| || || || Sbjct 343 CGCCGACCAGCGAT-GTG--GAATTGCCCTACGACTTTTCCAGCGCCGTAGAACTACTGG 399 Query 178 AGCTGTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCT 237 ||||||| | ||| |||||| ||| |||| |||||| |||| || ||| | | Sbjct 400 CCTTGTGCAACAAGCACGGCCTGCGGGTTTCCGAGCTGATGATGGCCAACGAACGCGCGT 459 Query 238 GGCGCAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATT 297 |||||||||| | || |||||||| |||||| || | ||||| | |||| || | Sbjct 460 GGCGCAGCGACGCCGACATCCGCAGTGGCCTGTTGCACATCTGGTCGGTGATGCGCGAAT 519 Query 298 GCGTGGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTC 357 |||||||||||||||| | ||||| ||| |||| |||||| || |||||| ||||| Sbjct 520 GCGTGGAGCAGGGCCTGCGCGATGAAGGCATCTTGCCAGGCGGCCTGGACGTGCCCCGTC 579 Query 358 GCGCTGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATC 410 |||| || || || ||||||||| ||| ||| | |||||| ||||| ||| Sbjct 580 GCGCGGCGAAATTGCACCGCAGCCTGCTGGAAATCGGCAAGCCGAATGTCATC 632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1228728311808