Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq245 199 1e-48 seq3499 96.9 1e-17 >seq245 Length=5303 Score = 199 bits (220), Expect = 1e-48 Identities = 121/128 (95%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 4658 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGTTTTCGCCAAGCCCGTTCCCTT 4599 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct 4598 GGCTGTAGTTTCGCTAGATAGTAGATAGTGATAGTGGGAATCTCGTTAAACCATTCATGC 4539 Query 400 GCGTCACT 407 ||||| || Sbjct 4538 GCGTCCCT 4531 >seq3499 Length=6126 Score = 96.9 bits (106), Expect = 1e-17 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6126 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 6074 Score = 93.3 bits (102), Expect = 1e-16 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 || |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 59 ATACATGCGCGTCCCTAATTAGAGGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635104602432