Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq1580 275 9e-72 >seq1580 Length=661 Score = 275 bits (304), Expect = 9e-72 Identities = 214/254 (84%), Gaps = 1/254 (0%) Strand=Plus/Plus Query 8 CAAGCGGTACAGGCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGATTTCCT 67 || ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 50 CAGGCGATACAGGCGACGCTTGAGCTT-GCCCAGGTACTGCATGCGCGCGACGATTTCCT 108 Query 68 GGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAGCATTT 127 | ||||| ||||| || ||||||||||||||||| || |||||||||||||||| ||| | Sbjct 109 GCCCGGTATAGCAACCCTTCTTGAAGCTGACGCCACCCACGGCCTGCAGGTTGATCATCT 168 Query 128 GCGGGATGAACAGCTCGCGGGTTTGCGCCATGACCTGGCCGATGCCGGCGCGGGTCTGGC 187 |||||||||||||||||||||| || ||||| ||||||||||| ||||||||| |||| | Sbjct 169 GCGGGATGAACAGCTCGCGGGTCTGGGCCATCACCTGGCCGATACCGGCGCGGATCTGCC 228 Query 188 CCAGCAGCCATTCGTTCAGACCTGCTTCTTTAAGCTGTGCAGTCAATTGGCTGCGTACGG 247 | |||||||| ||| ||| |||| | || || | | || ||| |||||||| Sbjct 229 CTAGCAGCCAGGCGTCCAGCGGGCCTTCGTCGAGGTGCTCGGCCAGTTGCTCGCGTACGG 288 Query 248 CCTCGGCCTGTTCG 261 | ||||||||||| Sbjct 289 CTGCGGCCTGTTCG 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735946453700