Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= AAMG01001589.1 Length=431 Score E Sequences producing significant alignments: (Bits) Value seq4890 158 3e-36 >seq4890 Length=1718 Score = 158 bits (174), Expect = 3e-36 Identities = 180/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 1 CGATAGCCATATCAAGAGCCTGCGCAGCAAGCTCAGGAGTGTGGCGGCGGATGCCGAGCC 60 ||| ||||| ||||||||||||||| |||||| | | ||| ||| || ||||| || Sbjct 6 CGACAGCCACATCAAGAGCCTGCGCGCCAAGCTGCGCACCGTGCAGGCCGACGCCGAACC 65 Query 61 GATCCAGACCCATCGCGGCCTNNNNNNNNNNNNNNNNNNNNNNNNCAGCTGATGCGCCTT 120 ||||||||||| |||||||| |||||||||||||| Sbjct 66 TATCCAGACCCACCGCGGCCTGGGCTACAGCTACAGCCCCGGGCACAGCTGATGCGCCTG 125 Query 121 GGGCTGCGGATTTTCCTGGTGTATGCGCTGTTTATCGGCCTGACCGGCTACTTCGTGCTC 180 || | || || ||||||||||| ||||| |||| ||||||||||||||| | ||| Sbjct 126 GGCATCCGCATCTTCCTGGTGTACTTCCTGTTCGTCGGGCTGACCGGCTACTTCATCCTC 185 Query 181 AACACCGTGATGAAGGAAATCCGCCCCGGCGTGCGCCAATCCACCGAAGAAACATTGGTG 240 ||||||||| | | | ||||| || |||||||| |||||||| ||||| ||||| Sbjct 186 AACACCGTGCGCGAACAGGTGCGCCCGGGTGTGCGCCAGTCCACCGAGGAAACCCTGGTG 245 Query 241 GACACCGCCA 250 |||||||||| Sbjct 246 GACACCGCCA 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1276704112320