Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq2290 183 8e-42 >seq2290 Length=1989 Score = 183 bits (202), Expect = 8e-42 Identities = 410/612 (67%), Gaps = 8/612 (1%) Strand=Plus/Minus Query 37703 AAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAAC 37762 |||| ||||| || || ||||||| ||||| || || | ||| | |||||| | Sbjct 1420 AAAGGTGACCGCACAGGTACCGGCACGAACTCGGTATTTGGTCACCAAATGCGCTTCGAT 1361 Query 37763 TTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTAT 37822 | | || || ||| | | || || || || |||| | |||| |||| || | Sbjct 1360 CTGTCGCAGGGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCATCTTTATT 1301 Query 37823 GAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTG 37882 ||| |||| |||||||| || || | || || |||| |||| ||| ||||| Sbjct 1300 GAATTGCTGTGGTTTTTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGTA 1241 Query 37883 ACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAA 37942 | || |||||||| ||||| ||||| ||||| |||| |||||| | || |||| |||| Sbjct 1240 TCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCAA 1181 Query 37943 TGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAA 38002 |||||||| ||| | | ||||| ||||||||||||| | | || ||| Sbjct 1180 TGGCGCTCCTGGCCGACCCCCGACGGTCGTCACATCGACCAGATCAGCCAGTTGGTGGAA 1121 Query 38003 GAGA-TCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGA 38061 ||| || | | ||||| | || || || ||| | || || ||||| || || || Sbjct 1120 CAGATTCGCAAG-AATCCCGACTCGCGTCGCCTGATCGTCTCGGCCTGGAACGTGGCGGA 1062 Query 38062 ATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCC---TTTCAGTTCTATGTCGCCAA 38118 ||| | ||||| ||||| || || | ||||| || ||||||||||| ||| | Sbjct 1061 TGTGGGCCAGATGGCTCTGCCCCCTTGCC---ACGCCCTGTTCCAGTTCTATGTAGCCGA 1005 Query 38119 CGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTT 38178 ||| | |||| ||| | | |||||| | |||| || | || |||| || Sbjct 1004 TGGCAAGCTGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTT 945 Query 38179 TAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGT 38238 || ||||| |||||||| ||| |||| || ||| | ||||| ||||| || |||| || Sbjct 944 CAATATCGCCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGTGATCTGGAAGT 885 Query 38239 CGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGC 38298 || || |||||| || ||||||||| ||| |||| || || | || ||||| Sbjct 884 GGGCGACTTCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCACTTCGAGCAAGC 825 Query 38299 GAAACTGCAGCT 38310 || ||||||| Sbjct 824 CGAATTGCAGCT 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130628349361500