Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq2290 183 8e-42
>seq2290
Length=1989
Score = 183 bits (202), Expect = 8e-42
Identities = 410/612 (67%), Gaps = 8/612 (1%)
Strand=Plus/Minus
Query 37703 AAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAAC 37762
|||| ||||| || || ||||||| ||||| || || | ||| | |||||| |
Sbjct 1420 AAAGGTGACCGCACAGGTACCGGCACGAACTCGGTATTTGGTCACCAAATGCGCTTCGAT 1361
Query 37763 TTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTAT 37822
| | || || ||| | | || || || || |||| | |||| |||| || |
Sbjct 1360 CTGTCGCAGGGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCATCTTTATT 1301
Query 37823 GAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTG 37882
||| |||| |||||||| || || | || || |||| |||| ||| |||||
Sbjct 1300 GAATTGCTGTGGTTTTTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGTA 1241
Query 37883 ACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAA 37942
| || |||||||| ||||| ||||| ||||| |||| |||||| | || |||| ||||
Sbjct 1240 TCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCAA 1181
Query 37943 TGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAA 38002
|||||||| ||| | | ||||| ||||||||||||| | | || |||
Sbjct 1180 TGGCGCTCCTGGCCGACCCCCGACGGTCGTCACATCGACCAGATCAGCCAGTTGGTGGAA 1121
Query 38003 GAGA-TCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGA 38061
||| || | | ||||| | || || || ||| | || || ||||| || || ||
Sbjct 1120 CAGATTCGCAAG-AATCCCGACTCGCGTCGCCTGATCGTCTCGGCCTGGAACGTGGCGGA 1062
Query 38062 ATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCC---TTTCAGTTCTATGTCGCCAA 38118
||| | ||||| ||||| || || | ||||| || ||||||||||| ||| |
Sbjct 1061 TGTGGGCCAGATGGCTCTGCCCCCTTGCC---ACGCCCTGTTCCAGTTCTATGTAGCCGA 1005
Query 38119 CGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTT 38178
||| | |||| ||| | | |||||| | |||| || | || |||| ||
Sbjct 1004 TGGCAAGCTGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTT 945
Query 38179 TAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGT 38238
|| ||||| |||||||| ||| |||| || ||| | ||||| ||||| || |||| ||
Sbjct 944 CAATATCGCCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGTGATCTGGAAGT 885
Query 38239 CGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGC 38298
|| || |||||| || ||||||||| ||| |||| || || | || |||||
Sbjct 884 GGGCGACTTCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCACTTCGAGCAAGC 825
Query 38299 GAAACTGCAGCT 38310
|| |||||||
Sbjct 824 CGAATTGCAGCT 813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130628349361500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |