Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq11715 205 2e-50 >seq11715 Length=6190 Score = 205 bits (226), Expect = 2e-50 Identities = 250/337 (74%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC--- 60 ||||| ||||| |||||| ||| |||||| ||| |||||||| | || |||||| Sbjct 2871 CCCGACAAGGGGAGTGAAAGAGAACCTGAAACCGGTTGCCTACAAACAGTTGGAGCCCAA 2812 Query 61 GAGTGATTC--GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 || | ||| |||||| |||| ||||||| |||||| | | ||| |||||| | || | Sbjct 2811 GATTTGTTCTGGGTGACAGCGTACCTTTTGTATAATGGGTCAGCGACTTAGTC-TGACGA 2753 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 || || ||||| | || || ||| || || ||||||||| || ||||||||| Sbjct 2752 GCAAGCTTAAG-----CCGGTAGGTGTAGGCGTAGCGAAAGCGAGTCTGAACAGGGCGTT 2698 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 |||| || | ||||| ||||||| |||||||| ||| ||||||||||||| || Sbjct 2697 CAGTTCGTCGGATTAGACCCGAAACCGAGTGATCTAGCCATGAGCAGGTTGAAGGTTGGG 2638 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 |||| | |||||||||||||| || |||| || || |||||||| | || | Sbjct 2637 TAACACCAACTGGAGGACCGAACCCATATCTGTTGCAATAGATTGGGATGACTTGTGGCT 2578 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||||||| ||| |||||| || Sbjct 2577 AGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGT 2541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972661356544