Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2924 152 2e-34 seq4581 136 2e-29 seq3364 102 3e-19 seq10764 100 1e-18 >seq2924 Length=16468 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 || |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| Sbjct 12588 TGCGACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCGGAGGAAACTCTGGTG 12647 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | || |||||||||| ||||||||||||||||| | |||||||||||||||| Sbjct 12648 GAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCGA 12704 >seq4581 Length=8978 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || | || |||||||||||||||||||||||||||| ||| ||||||| || Sbjct 4312 AGAGCGTAAACGGTGCGACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCGGA 4371 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||| ||||||| | || ||||||||| ||||| ||||||||||| |||||||| Sbjct 4372 GGAAACTTTGGTGGAAGTCCGATGCGGTTCTGACGTGCTAATCGATCGTCTGATTTGGGT 4431 Query 674 ATAGGGGCGA 683 || |||||| Sbjct 4432 GTATGGGCGA 4441 >seq3364 Length=7357 Score = 102 bits (112), Expect = 3e-19 Identities = 108/140 (77%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||||||| || ||||| |||| | || |||| | ||| ||||||||||||| Sbjct 4847 GAGTAGGGTTGTTTGAGATCGCAGCCCTAAGTAGGTGGTATACTTCATCTAAAGCTAAAT 4906 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | || | | || |||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 4907 A-TGACTACGAATCCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGTACTTTGAA 4965 Query 159 AAGAGAGTTAAAAAGCACGT 178 |||||||| || || |||| Sbjct 4966 GAGAGAGTTTAAGAGGACGT 4985 >seq10764 Length=5558 Score = 100 bits (110), Expect = 1e-18 Identities = 77/91 (85%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||| ||||||||||||||| |||| ||| ||||||| ||||||||||||||||| Sbjct 4337 GACCCAAAAGATGGTGAACTA---CTGAGCAGGATGAAGCCGGAGGAAACTCTGGTGGAA 4281 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 | || |||| ||||| |||||||||||||| Sbjct 4280 GTCCGAAGCGTTTCTGACGTGCAAATCGATC 4250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079694294600