Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq11715 168 9e-40 >seq11715 Length=6190 Score = 168 bits (186), Expect = 9e-40 Identities = 186/248 (75%), Gaps = 11/248 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || ||||| ||| ||| || ||||||| Sbjct 1616 CTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTT-GCGACTTCGCAG 1674 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||||| ||| || ||| ||| ||| || | ||| Sbjct 1675 AGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTCTGTGCCACCCTCATCTGCT-- 1732 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | | | || || | ||||| ||||||||||| | || |||||||| Sbjct 1733 --------TGCGCAAACAAGGGTCACGCTTCTTCCGAAGTTACGCGTGCAATTTGCCGAG 1784 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | | |||||| | | | |||||| |||| ||||||| | ||||| |||||||| Sbjct 1785 TTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATACTCTACCAGTCCACCAGTGTCGGT 1844 Query 241 TTACGGTA 248 ||| |||| Sbjct 1845 TTAGGGTA 1852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694304126796