Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq877 100 5e-19 >seq877 Length=10434 Score = 100 bits (110), Expect = 5e-19 Identities = 153/210 (73%), Gaps = 16/210 (8%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| | ||||||| ||||||| |||| |||||||||||||||||||| ||||| |||| Sbjct 4580 TCCTTGAGTGTAGTTCGCGTGCAGCCCCTAACATCTAAGGGCATCACAG-CCTGTCATTG 4522 Query 72 CCTCAAACT--TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA----GC--CAGCCAC 123 |||| || | || || | | | ||| | | ||||| || || | | Sbjct 4521 T-TCAATCTCGTACAA---CTAAACGTTGTTTGTCTCACCAAGAAAAACGCTGCACTCCC 4466 Query 124 CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAT-CGGAATTAAC 182 ||| | | || | ||||||| ||||||| |||||| ||| ||| |||||||||| Sbjct 4465 GAACAAATATTGACGT--CTATTTAATAGGTTAAAGTCTCGCTCGATATTCGGAATTAAC 4408 Query 183 CAGACAAATCACTCCACCAACTAAGAACGG 212 ||||||||||| |||||| ||||||||||| Sbjct 4407 CAGACAAATCAATCCACCTACTAAGAACGG 4378 Score = 80.6 bits (88), Expect = 4e-13 Identities = 61/71 (86%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTAT-CGGAATTAACCAGACAAATCACTCCACCA 201 |||||| ||||||| |||||| ||||||| | ||||||||||||||||||| |||||| Sbjct 108 TATTTAATAGGTTAAAGTCTCGCTCGTTATTCAGAATTAACCAGACAAATCAATCCACCG 49 Query 202 ACTAAGAACGG 212 | ||| ||||| Sbjct 48 AATAAAAACGG 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796689988812