Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq6684 109 9e-22 seq9415 91.5 3e-16 seq5684 77.0 6e-12 >seq6684 Length=3727 Score = 109 bits (120), Expect = 9e-22 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 115 AAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 56 Query 105 ATC 107 ||| Sbjct 55 ATC 53 >seq9415 Length=6754 Score = 91.5 bits (100), Expect = 3e-16 Identities = 88/112 (79%), Gaps = 12/112 (11%) Strand=Plus/Minus Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||| |||||||||||||||||||||||||||||||||||| ||||||| || ||| Sbjct 4474 GCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTCACACCTCT-TACTGAAA 4416 Query 245 ---TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||| ||| | ||||||||||| |||||| ||| ||||||| Sbjct 4415 TCTTTTC--------AAATCAGCGATAGGCCACGCTTTCACGGTCTGTATTC 4372 >seq5684 Length=59389 Score = 77.0 bits (84), Expect = 6e-12 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 119 GAATTCTGCTT-CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 ||||||||||| | ||| |||| ||| | |||||| ||||| |||| ||||||||| | Sbjct 58438 GAATTCTGCTTCCAATAT-ATAGAAAGCGTAGACATCAAAGGACCAAAGAGCAACGTCTC 58380 Query 178 TATGAACGCTTGGCTGCCACA 198 ||||||| ||||||| ||||| Sbjct 58379 TATGAACACTTGGCTACCACA 58359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854278230912