Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq11715 268 2e-69 >seq11715 Length=6190 Score = 268 bits (296), Expect = 2e-69 Identities = 263/336 (78%), Gaps = 19/336 (6%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || | | ||||| | ||| |||||||||| ||||||||||||||| ||||| Sbjct 5298 CTTTACAACCCTAGGGCCTTCAT-CACTCACGCGGCAT-GGCTGGATCAGGCTTGCGCCC 5355 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 5356 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 5415 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||||||||||||||||| || |||||||||||||||| ||| ||||| | Sbjct 5416 TGTGGC-GATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCTTTACCCTA 5474 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGA-AGGTCCCCTGCT 239 ||||||||||||||| || | ||||||| || |||| | | || Sbjct 5475 CCAACTAGCTAATCCAACATGGGCTCAT---------CATTCTCCGATAAAT------CT 5519 Query 240 TTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA 299 ||| || ||| ||||| |||||||||| |||||| ||||| || | Sbjct 5520 TTCCCCAAAAGGGCGTATACGGTATTAGCACAAGTTTCCCTGAGTTATTCCGTAGAGAAC 5579 Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 || ||||||| | |||||||||||||||| ||| || Sbjct 5580 GGTAGATTCCCATGCATTACTCACCCGTCTGCCACT 5615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071847218560