Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq11715 352 1e-94 >seq11715 Length=6190 Score = 352 bits (390), Expect = 1e-94 Identities = 414/552 (75%), Gaps = 16/552 (3%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACC-ATCCAGTGCT 111 || |||||||||||| |||| || ||||| ||| | |||| ||| || ||||||| Sbjct 2429 GGTATTCGGAGTTTGATTGAGATCAGTAAGACGGTGAGTCCCCATTACCCATTCAGTGCT 2488 Query 112 CTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTA 171 ||||| || | | | | | ||||| |||||||| |||||| ||||||||||||| Sbjct 2489 CTACCCCCTGAGGTATTCGCCCAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCTA 2548 Query 172 TCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCT 231 || | |||||||||||||||||||||||| ||||| |||||||| || |||| Sbjct 2549 TCTCCGAGTTTGATTGGCCTTTCACCCCTAGCCACAAGTCATCCCAATCTATTGCAACAG 2608 Query 232 AAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCA 291 | |||||||||||||||| ||| |||||| ||||||||||| ||||| ||||||| Sbjct 2609 ATATGGGTTCGGTCCTCCAGTTGGTGTTACCCAACCTTCAACCTGCTCATGGCTAGATCA 2668 Query 292 CTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACG 351 || | ||||||||| || ||| | ||||||| ||| ||||||||||||||||| Sbjct 2669 CTCGGTTTCGGGTCTAATCCGACGAACTGA-ACGCCCTGTTCAGACTCGCTTTCGCTACG 2727 Query 352 GCTACCCCACACGGGTTAACCT--CGCGACACAACGCAAACTCGCAGGCTCATTCTTCAA 409 |||| || ||| |||| || | || || | | || |||| | | |||| | ||| Sbjct 2728 CCTACACCTACCGGCTTAAGCTTGCTCGTCAGA---CTAAGTCGCTGACCCATTATACAA 2784 Query 410 AAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACAT 469 |||| |||| |||||| | || ||| ||| ||||| || | ||||||||| Sbjct 2785 AAGGTACGCTGTCACCCAGAAC--AAA----TCTTGGGCTCCAACTGTTTGTAGGCAACC 2838 Query 470 GGTTTCAGGTACTATTTCACTCCCC--GCCAGGGGTACTTTTCACCTTTCCCTCACGGTA 527 |||||||||| || ||||||||||| | | ||||| ||||||||||||||||||||||| Sbjct 2839 GGTTTCAGGTTCTCTTTCACTCCCCTTGTC-GGGGTGCTTTTCACCTTTCCCTCACGGTA 2897 Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 ||||| |||||||||||| | ||||| |||||||| | |||||| | ||| |||| Sbjct 2898 CTTGTTCGCTATCGGTCATGCACGAGTACTTAGGCTTGGAGAGTGGTCTCCCCATGTTCA 2957 Query 588 CACGAAATTTCA 599 || |||||| Sbjct 2958 GACAGGATTTCA 2969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817340955648