Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq11715 334 2e-89 >seq11715 Length=6190 Score = 334 bits (370), Expect = 2e-89 Identities = 332/416 (80%), Gaps = 14/416 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| || | || || |||| | | ||||||||||||||||| || ||| Sbjct 2580 CCACAAGTCATCCCAAT--CTATTGCAACAGATATGGGTTCGGTCCTCCAGTTGGT-GTT 2636 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||||||| |||||||| ||| || |||||| | |||||| |||||||| | || | Sbjct 2637 ACCCAACCTT-CAACCTGCTCAT-GGCTAGATCACTCGGTTT-CGGGTCTAAT-CCGACG 2692 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTT 187 ||| ||||||| | ||||||||||| |||||||||| | |||| | |||||||| Sbjct 2693 AACTGAACGCCCTGTTCAGACTCGCTTT-CGCTACGCCTACACCTACCGGCTTAAGCTT- 2750 Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCA--ACAAAG 245 || | | | |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 2751 GCTCGTCAGACTAAGTCGCTGACCCATTATACAAAAGGTACGCTGTCACCCAGAACAAAT 2810 Query 246 --TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 |||||||| |||| ||||| ||| |||||||||| ||| |||||||||||| ||| Sbjct 2811 CTTGGGCTCCAACTGTTTGTAGGCAACCGGTTTCAGGTTCTCTTTCACTCCCCTTGTCGG 2870 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||| |||||| |||||||||||||||||| |||| |||||||||| || |||| |||| Sbjct 2871 GGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCATGCACGAGTACTTAG 2930 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||| ||||| |||||| |||||||| |||| |||| ||| ||||||| Sbjct 2931 GCTTGGAGAGTGGTCTCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTC 2986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241423047168