Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq11715 217 3e-54 >seq11715 Length=6190 Score = 217 bits (240), Expect = 3e-54 Identities = 302/410 (74%), Gaps = 16/410 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| || |||| | |||| ||||| | Sbjct 1974 CGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGGCTAACCCTGCTCAGATTAACTTTAAG 2033 Query 61 CTGGAACCCTTGGATAATCGGCG-GACGGGAT-TCCCACCCGTCACACGCTACTCATGCC 118 | |||||||||||| |||||| || | | || ||| | | | || |||||||| | Sbjct 2034 CAGGAACCCTTGGACTTTCGGCGAGAGTGTCTCTCACACTCTTTAT-CGTTACTCATGTC 2092 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGC-TTCACCA-CTGAC 175 ||||||||||| | || | ||||| | | |||| | | ||||| || || Sbjct 2093 AGCATTCTCACTTCTGAT-ACCTCCAGGAT-CTCTCACGAGTATCCCTTCACAGGCTTAC 2150 Query 176 ACGACGCTCCCCTACCCAACCACACAGGTTG--CCACAGCTTCGGCGGATAACTTAAGCC 233 | ||||||| ||||| | |||| | || |||||||||||| | || ||| |||| Sbjct 2151 AGAACGCTCCGCTACC-ACGCACATACGTGCATCCACAGCTTCGGTGTATGGCTTTAGCC 2209 Query 234 CCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACTCTTTC 288 ||| |||||| ||||||| | | ||| |||||||||||| |||||| ||||| Sbjct 2210 CCGGTACATTTTCGGCGCAAAGACCCTTATCTAGACCAGTGAGCTGTTACGCTTTCTTTA 2269 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 || |||||||||||| |||||||| |||||||||| | | | | |||||||||||||| Sbjct 2270 AATGATGGCTGCTTCTAAGCCAACATCCTGGTTGTTTTGGGATCCTCACATCCTTTCCCA 2329 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || || || |||||||| |||||| || || || ||| |||| |||||| Sbjct 2330 CTTAGCCATAACTTAGGGACCTTAGATGGTGGTCAGGGTTGTTGCCCTCT 2379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177432168448