Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq11715 224 2e-56 >seq11715 Length=6190 Score = 224 bits (248), Expect = 2e-56 Identities = 207/262 (79%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 21 CGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCAT 80 ||||||| | | |||| || ||||||||||||||||||||||| || ||||||||| || Sbjct 5001 CGTCAGTAATGGACCAGTAAGCCGCCTTCGCCACTGGTGTTCCTGCGAATATCTACGAAT 5060 Query 81 TTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAA 140 |||||| |||||| || |||||| || ||||| | |||||||| |||| ||||| Sbjct 5061 TTCACCTCTACACTCGCAATTCCACTTACCTCTTCCATACTCAAGACTTCCAGTATCAAA 5120 Query 141 TGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCC 200 |||| ||||||||||| | |||||| ||||||| |||||||| || Sbjct 5121 GGCAGTTCCGGGGTTGAGCCCCGGGATTTCACCCCTGACTTAAAAGTCCGCCTACGTGCG 5180 Query 201 CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCA 260 |||||| |||| |||||||| | |||||| ||| ||| |||||||||||||||||||||| Sbjct 5181 CTTTACGCCCAGTAAATCCGAACAACGCTAGCCCCCTTCGTATTACCGCGGCTGCTGGCA 5240 Query 261 CGTAGTTAGCCGTGGCTTATTC 282 || ||||||||| ||||| ||| Sbjct 5241 CGAAGTTAGCCGGGGCTTCTTC 5262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828685570692