Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq8936 390 4e-106 >seq8936 Length=1944 Score = 390 bits (432), Expect = 4e-106 Identities = 452/616 (73%), Gaps = 54/616 (9%) Strand=Plus/Minus Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63 || ||||| | |||| |||||||||| ||| |||||| | |||| | ||||||||| | Sbjct 1248 TCCACCGTGGTGTTCTGGTCGTTCCGCATCATGGTCGGGCTGGGCATGCTGATGATCGCC 1189 Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 || || || |||| |||||| |||| | ||| || |||||| || |||| Sbjct 1188 GTGGGCCT-GTGGAGCCTGTGGCT-GCGCAAGCGCGGCACCCTGTACAGCTCGCGCCCGT 1131 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 |||| |||||| | |||||||||||||||||||| |||||||||| || |||||||||| Sbjct 1130 TCCTCTACCTGACCCTGTGGATGGGCCCGTCCGGGCTGATCGCGATCCTGGCCGGCTGGT 1071 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGAT- 242 ||||||| || |||| || |||||||||||||| ||||| |||||||| || || ||| Sbjct 1070 TCACCACCGAGGTCGGTCGCCAGCCGTGGGTGGTGTACGGGCTGATGCGTACCGCCGATG 1011 Query 243 GCGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTG 302 |||| ||| || ||| | ||| || || || |||||| |||||||||||||| Sbjct 1010 GCGT-GTCCAACCACAGCTATGCGCAACTGGGCATCACCCTGGTGATGTTCGTGGTGGTG 952 Query 303 TACTTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCG 362 ||||||||||||||||| || || || |||||||||||||| ||||||||||| || ||| Sbjct 951 TACTTCGCGCTGTTCGGCGCGGGGCTCGGCTACATGATGCGTCTGGTGCGCAAGGGGCCG 892 Query 363 CAGACCCACGAAGGCGA------------------------------------------- 379 | ||| ||| ||||| Sbjct 891 GAAACCGGCGAGGGCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 832 Query 380 --TGAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCCGTCCGTTGTCTGCC 437 ||||||||||| || || ||||||||| ||||| | || || || |||||||| || Sbjct 831 NNNGAGCCGACCCATGGCGGGCCTGGCCAGCAACGCCCCCCGGCGCGGCCGTTGTCGGCT 772 Query 438 GCCGATGATGGCAGCGATGACGACCACACCCACATCCAGCACAAGGGGCATTGA--GATG 495 ||||| || | | | ||||||||| | || || | ||||||| | ||| ||| Sbjct 771 GCCGACGACGACCATGCCGACGACCACGC---CAGCCTGAGCAAGGGGAACTGACTCATG 715 Query 496 GGTATTGATCTTCCGCTGATCCGGGCCGTGATCATCATCTTCGGCATCATGATGTACGTG 555 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 714 GGTATTGATCTTCCGCTTATCTGGGCCGTGATCATCATCTTCGGCATCATGATGTACGTG 655 Query 556 GTCATGGACGGCTTCG 571 || ||||||||||||| Sbjct 654 GTGATGGACGGCTTCG 639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724554181504