Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002172.1 Length=233 Score E Sequences producing significant alignments: (Bits) Value seq13080 210 3e-52 >seq13080 Length=8113 Score = 210 bits (232), Expect = 3e-52 Identities = 186/232 (80%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 2 CGAGTGGTCAAGCCGACCTTCGTGCGCCATGGCAAAACCTTGATCTAATCTATTTCCGGC 61 || |||||||||||||||||||||||||| ||||| | | |||||| | | ||||||| Sbjct 7535 CGGGTGGTCAAGCCGACCTTCGTGCGCCAGGGCAAGATCCTGATCTGAATTCATTCCGGC 7476 Query 62 AGGCCAATGGCCGCTGACATTACTTCTTGAGGACACAGACTATGAGCGATATCCCTGCCG 121 |||| | |||||||| | ||||||| | | ||||||||| ||||||| |||| Sbjct 7475 GGGCCGA---CCGCTGACCTG-----TTGAGGAAAGACACTATGAGCAATATCCCCGCCG 7424 Query 122 ACCTGCGTTTTGCCGAAAGTCACGAATGGGCCCGTCTGGAAGCTGACGGCACCGTGACCG 181 |||||||||||||||| || ||||| |||||| | |||||||| ||||| ||||| |||| Sbjct 7423 ACCTGCGTTTTGCCGAGAGCCACGAGTGGGCCAGGCTGGAAGCCGACGGTACCGTCACCG 7364 Query 182 TGGGTATCTCCGACCATGCCCAGGAAGCGTTGGGGGATGTGGTGATTGTCGA 233 |||| ||| |||||| ||||||||||| |||| || ||||| | ||||| Sbjct 7363 TGGGCATCAGCGACCACGCCCAGGAAGCCCTGGGCGACGTGGTATTCGTCGA 7312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 646310753976