Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq11715 297 5e-78 >seq11715 Length=6190 Score = 297 bits (328), Expect = 5e-78 Identities = 316/412 (77%), Gaps = 35/412 (8%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| | ||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 5298 CTTTACAACCCTAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTGCGCCCAT 5357 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 5358 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 5417 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||| | |||||||||||||||||||| |||||||||||| ||| |||| |||||| || Sbjct 5418 TGGC-GATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCTTTACCCTACC 5476 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||||||||||| | |||| ||||| || | || || | ||| | Sbjct 5477 AACTAGCTAATCCAACATGGGCTCATC--ATTCTCCGA----TAAATCTTTCCCCAAAAG 5530 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA-GG 302 | ||| ||| |||||||||| |||||| ||||| || | | | || Sbjct 5531 G----GCG----TATACGGTATTAGCACAAGTTTCCCTGAGTTAT-TCCGTAGAGAACGG 5581 Query 303 CAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCC 362 || |||||| ||||||||||||||| |||||| | | ||||| || Sbjct 5582 TAGATTCCCATGCATTACTCACCCGTCTGCCACT-GCCTCCGAAG-AG------------ 5627 Query 363 TGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 5628 ----ACCGTTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCGTTCTGAG 5675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222225783552