Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq11715 374 3e-101 >seq11715 Length=6190 Score = 374 bits (414), Expect = 3e-101 Identities = 285/334 (85%), Gaps = 2/334 (1%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||||||||||||| ||||| ||| |||||||||||||||| |||| | ||||||| Sbjct 5488 GATTAGCTAGTTGGTAGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAG 5429 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | |||||| ||||| ||| |||||||||||| ||| |||||||||||||||||||||||| Sbjct 5428 GATGATCG-CCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGG 5370 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| ||||||||| ||||||||| |||| | |||||||||| |||||||||| | Sbjct 5369 GAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCCT 5310 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||| |||||||||| || | |||||||||||||||| | || |||||||||| Sbjct 5309 AGGGTTGTAAAGCTCTTTCACCGGTGAAGATAATGACGGTAACCGGAGAAGAAGCCCCGG 5250 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||||| |||||||||||||||||||||||| |||||||||||||| | |||| ||||| Sbjct 5249 CTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGATTTACT- 5191 Query 467 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||||||| | |||||| || | ||||||| Sbjct 5190 GGGCGTAAAGCGCACGTAGGCGGACTTTTAAGTC 5157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497386562048