Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq11715 257 6e-66 >seq11715 Length=6190 Score = 257 bits (284), Expect = 6e-66 Identities = 355/484 (73%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| |||||||||| |||| | || ||||||||||||| ||||||||| |||| Sbjct 2716 CGAGTCTGAACAGGGCGTTCAGTTCGTCGGATTAGACCCGAAACCGAGTGATCTAGCCAT 2657 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| |||||||| ||||||| ||||||||| ||||| || | Sbjct 2656 GAGCAGGTTGAAGGTTGGGTAACACCAACTGGAGGACCGAACCCATATCTGTTGCAATAG 2597 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||| ||||| |||||||||||||| || |||||| ||| ||||||||||||| Sbjct 2596 ATTGGGATGACTTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGTTCTC 2537 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAG-TATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| |||||||||||| || | | | ||| ||||||||||||||| ||| Sbjct 2536 CGCGAAATCTATTTAGGTAGAGCGTTGGGCGAATACCTCAGGGGGTAGAGCACTG-AATG 2478 Query 240 GCT-AGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAATGCGCATCAGTTTT 297 | | | |||| | || ||||| | | || | |||||||||||| | ||| | Sbjct 2477 GGTAATGGGGACTCACCGTCTTACTGATCTCAAT-CAAACTCCGAATACCTGAGAGTACT 2419 Query 298 ACCGCG-GGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 ||| | || | ||| ||||||||| |||||| ||||| || || || ||| Sbjct 2418 ACCCAGCAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGCAACAACCCTGAC 2361 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | || |||||| ||| || | | ||||||| | || || || | | | || || Sbjct 2360 CACCATCTAAGGTCCCTAAGTTATGGCTAAGTGGGA--AAGGATGTGAGGATCCCAAAAC 2303 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 | | ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| || Sbjct 2302 AACCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAACAGCTCACTGGT 2244 Query 477 CGAG 480 | || Sbjct 2243 CTAG 2240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689359198208