Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq5973 131 3e-28 seq11715 109 1e-21 >seq5973 Length=486 Score = 131 bits (144), Expect = 3e-28 Identities = 189/265 (71%), Gaps = 15/265 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | || ||| ||||||||||| | ||||||| Sbjct 218 AGAGCAAACGGTGGATGCCTTGGCATCTGGAGCCGAAGAAGGACGTAGCAATCTGCGATA 277 Query 61 AGCTGCGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 ||| |||||| ||| || || ||||||||| | | ||||||||||||||||| | Sbjct 278 AGCCTCGGGGAACTGAT-AAGCAAGTTTTGATCCGAGGGTGTCCGAATGGGGAAACCCCG 336 Query 120 CCCTTTGG------------GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACG 166 | || || | | | ||||||| ||||| | | || ||||| Sbjct 337 CTGGGCGGCGTGCCGACCTAGTGACTCCCGCCTGAATATATAGGGCGGGTAGAGGGAACG 396 Query 167 CGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTA 226 || ||| |||||||||| |||| | |||||| ||||| |||||| |||||| |||| Sbjct 397 TGGGGAAGTGAAACATCTCAGTACCCACAGGAAGAGAAAGCAACCGCGATTCCGTTAGTA 456 Query 227 GTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||||||| |||| || || Sbjct 457 GTGGCGAGCGAAATCGGATCAGGCT 481 >seq11715 Length=6190 Score = 109 bits (120), Expect = 1e-21 Identities = 95/117 (81%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| |||||||||||||||||| || ||||||| Sbjct 3384 AGGGCAATTGGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATA 3325 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| ||||||| | || || || |||||||||| ||||||||||||||| ||||| Sbjct 3324 AGCGTCGGGGAG-GTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGCAACCC 3269 Score = 107 bits (118), Expect = 4e-21 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 160 GCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCC 219 |||||||| | ||||||||||||||||||| |||||||||| || ||||||||||| ||| Sbjct 3167 GCGAACGCAGGGAACTGAAACATCTAAGTACCTGCAGGAAAGGACATCAACCGAGACTCC 3108 Query 220 CAAAGTAGTGGCGAGCGAA 238 ||||||||||||||||| Sbjct 3107 GCAAGTAGTGGCGAGCGAA 3089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918269109632