Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq11715 399 7e-109 >seq11715 Length=6190 Score = 399 bits (442), Expect = 7e-109 Identities = 430/564 (76%), Gaps = 24/564 (4%) Strand=Plus/Plus Query 4 ACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGCCAA 62 |||||| |||| ||||||| || ||| ||| || ||||| || | | |||| || | Sbjct 1116 ACTTGTCTGTCTTGCAGTCAGGCGGGCTTATGCCATTGCACTCGACGAAC-GATTTCCGA 1174 Query 63 CCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTT 122 || ||||| ||| | | ||||||||||||| ||| ||||| | ||||||||||| Sbjct 1175 CCGTTCTGAGCCCACCATCGCGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCAGTC 1233 Query 123 AAACTACCCACCAGGCACTGTCCCCAACCCAGATC-ATGGGCCAAGGTTAGATATCCACT 181 ||||||||||||| ||| |||| |||| ||| | ||| | |||||| ||| | Sbjct 1234 AAACTACCCACCATACACGGTCCTGGACCCGGATATACGGGTCGCAGTTAGACATCTATG 1293 Query 182 ACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTC 241 ||| | || |||||||||||| | |||||||| | || ||| |||| ||| |||| Sbjct 1294 ACGATAAGGGTGGTATTTCAAGGATGACTCCACGAAGGCTGGCGCCTCCGCTTCAAAGTC 1353 Query 242 TCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-C 300 | |||||||||||||||| ||| | ||||||| | |||||||||| ||||| | | Sbjct 1354 TACCACCTATCCTACACATGTCGCCACAAATGCCAGTGTAAAGCTATAGTAAAGGTGCAC 1413 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||| |||| ||| | ||||||| || | | | ||||||||| | Sbjct 1414 GGGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTGA 1473 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | ||| | | |||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 1474 GTCTGCGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 1533 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1534 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCA 1593 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 ||| | | || ||| ||| ||||||||||||||||||||||| Sbjct 1594 ATT-CAAGGCTTGCAC-------------CTC-----TCCTCTTAACCTTCCAGCACCGG 1634 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| || ||||| ||| Sbjct 1635 GCAGGCGTCAGACCCTATACGTCG 1658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702157373952