Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9573 98.7 3e-18 seq7478 98.7 3e-18 seq7470 75.2 3e-11 >seq9573 Length=8063 Score = 98.7 bits (108), Expect = 3e-18 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 81 ATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGA 140 |||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||||| Sbjct 7021 ATTTTCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTTTCAAGCGCCCTCTCCGGA 7080 Query 141 ATCGAACCC 149 || ||||| Sbjct 7081 GTCAAACCC 7089 Score = 93.3 bits (102), Expect = 1e-16 Identities = 59/63 (94%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 81 ATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGA 140 |||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 7194 ATTTTCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT-TCAGGCGCCCTCTCCGGA 7252 Query 141 ATC 143 || Sbjct 7253 CTC 7255 Score = 84.2 bits (92), Expect = 7e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCT 135 ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 6866 TTTTCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCCCAGGCGCCCTCT 6919 >seq7478 Length=19610 Score = 98.7 bits (108), Expect = 3e-18 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145 ||||||||||||||||||||||||||||||||||||| || || ||||||||||| || | Sbjct 18456 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCCCAAGCGCCCTCTCCGGAGTCAA 18397 Query 146 ACCCTAATT 154 |||||| || Sbjct 18396 ACCCTACTT 18388 >seq7470 Length=21421 Score = 75.2 bits (82), Expect = 3e-11 Identities = 49/53 (92%), Gaps = 1/53 (2%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 125 ||| ||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 5183 ATTTGGTAATTA-CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTATCA 5234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510184737792