Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq12683 98.7 2e-15 >seq12683 Length=10145 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/71 (92%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 3788 TTTAGGACTG-TAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTT 3846 |||||| ||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 8750 TTTAGGTCTGGTAGTTCAGCTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTT 8691 Query 3847 CGATTCCCGTC 3857 ||| ||||||| Sbjct 8690 CGAGTCCCGTC 8680 Score = 96.9 bits (106), Expect = 5e-15 Identities = 70/80 (88%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 3779 GGAGAACCATTTAGGACTG-TAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGG 3837 |||||| || ||| ||| ||||||||||||||||||||| ||||||||||||| | || Sbjct 8893 GGAGAAGGGTTGAGGTCTGGTAGTTCAGCTGGTTAGAATACATGCCTGTCACGCATGGGG 8834 Query 3838 TCGCGGGTTCGATTCCCGTC 3857 |||||||||||| ||||||| Sbjct 8833 TCGCGGGTTCGAGTCCCGTC 8814 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856 |||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||| Sbjct 8639 GTAGTTCAGCTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGAGTCCCGT 8580 Query 3857 C 3857 | Sbjct 8579 C 8579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771404949721440