Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031917.1 Length=39949 Score E Sequences producing significant alignments: (Bits) Value seq4764 120 8e-23 >seq4764 Length=15780 Score = 120 bits (132), Expect = 8e-23 Identities = 212/305 (70%), Gaps = 8/305 (3%) Strand=Plus/Plus Query 39390 GGGCCCCACGATATGAATAACCGCGAGTTCGCATCAAAGGGTAAGACTCGTAAGGAATTG 39449 ||||| || ||||| ||||||| ||||| | ||| | | |||| |||| ||| || Sbjct 3051 GGGCCACATGATATCGATAACCGTGAGTTTGGATCTGATGCTAAGTCTCGACGAGAACTG 3110 Query 39450 GCTAAAGAAGGTGTTGAGT---ATGGTAACAAGAAATACTCAGCTAACTTTGAAATAGTG 39506 || ||||| || | ||| | |||||||||| | || | | ||| Sbjct 3111 GCGCGTGAAGGGTACGAAATCGACGGTCA---GAAATACTCAATGATATTCAAGGTTGTG 3167 Query 39507 CCCAAGCTTGGTGTTGATGATGGCATTCAATTGGTGCGCGAAATGTTGCCTAATTGTGTA 39566 || ||| ||||||| ||| |||||| ||| |||||| ||||| || | ||||| ||| Sbjct 3168 CCAAAGGTTGGTGTGGATACTGGCATAGAATCGGTGCGTGAAATCCTGTCCAATTGCGTA 3227 Query 39567 TTTGACGAACAGCAATGTGAACAGGGTATAATAGCA-CTTGAGAGCTACCGTAAAGAATG 39625 ||||| ||| || |||| |||| || || || || || ||||||||||||||||| Sbjct 3228 TTTGATGAAGAGAAATGCAGTGAGGGGAT-ATCTCATCTGGAAAGCTACCGTAAAGAATG 3286 Query 39626 GAATGACAAGCTTGGTTGCTGGCGTGATTCACCTTTGCACGATTGGGCATCGCATGGAGC 39685 | ||||||||| ||||||||| ||| || | || || | |||| ||||| || Sbjct 3287 GGATGACAAGCGCGGTTGCTGGAAAGATAAGCCACTTCATGACTTCACATCACATGGTGC 3346 Query 39686 TGATG 39690 ||||| Sbjct 3347 TGATG 3351 Score = 84.2 bits (92), Expect = 6e-12 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 39020 TGACCGTCAAAAGGCTTGGTATTCTGCTAAATGGAAAGAC-CTTGGAGATGACATCAAAC 39078 ||| ||||||||||||||||||| || ||| | |||||| || || |||||||| || | Sbjct 2696 TGAACGTCAAAAGGCTTGGTATTTCGCCAAA-GAAAAGACGCTCGGCGATGACATGAAGC 2754 Query 39079 GCGAGTACCCATCAACACCCAAAGAAGCGTTTGAGCAATCTATCGAGGGTGCTTACTACG 39138 | || ||||| || | ||| || || || ||||||| | || || |||||||||| Sbjct 2755 GGGAATACCCGTCGATCCCCTCTGAGGCATTCCAGCAATCAGTAGAAGGCGCTTACTACG 2814 Query 39139 CAACTCAATT 39148 | | ||||| Sbjct 2815 CCAAGCAATT 2824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127693585160264