Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq12101 113 2e-19 seq1244 89.7 2e-12 >seq12101 Length=22924 Score = 113 bits (124), Expect = 2e-19 Identities = 132/176 (75%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 364395 CCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAG 364454 |||||||||| ||| || | | |||||| |||||||||||||| | || | ||| Sbjct 12529 CCTTGGAGGCA-----CTCGATCAAGTGACCAATTGTCATACGAGAGGGGACGGCGTGAG 12583 Query 364455 GGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCGGGA-GGA 364513 |||||||||| ||||| || ||||| || || |||||||| ||||| || || Sbjct 12584 GGTTGATGATAATGTCTGGGGAGATGCCCTCGCAAGTGAAGGGCATGTCTTCTTGACGGT 12643 Query 364514 ACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 || |||| ||| ||||| ||||| || | | ||||||||| ||||||||||| || Sbjct 12644 AC-ATGATACCCATGGTACCCTTCTGTCCGTGGCGAGAAGCGAACTTGTCGCCGAT 12698 >seq1244 Length=3527 Score = 89.7 bits (98), Expect = 2e-12 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| ||||||||||| || | || | ||||||||||||| ||||| || ||||| Sbjct 633 ACCAATTGTCATACGAGAAGGGACGGCGTGAGGGTTGATGATAATGTCGGGGGAAATGCC 692 Query 364483 GTCAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCG 364541 || || |||||||||||||| || || || || | || || || ||||| || Sbjct 693 CTCGCAAGTGAAGGGCATATCTTCTTGACGGTAC-ATAATTCCCATAGTACCCTTCTGTC 751 Query 364542 CATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | ||||| || ||||||||||| || Sbjct 752 CGTGACGAGATGCGAACTTGTCGCCGAT 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884542212675036