Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2741 159 1e-36 >seq2741 Length=3316 Score = 159 bits (176), Expect = 1e-36 Identities = 212/295 (72%), Gaps = 16/295 (5%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||| |||||| |||| | || |||||| ||||| || Sbjct 692 CGTCCCGTCTTGTAACACGGACCGAGGAGTGTAACTTGTACGCGAGTCAGAGGGTGGTAA 751 Query 465 ACCCGTGCGCGTAATGAAAGTGAACGGAGGT--------------GGGAACC-CGTGAG- 508 |||| ||| ||||||||| || | ||| |||| || ||| || Sbjct 752 ACCCAACGGCGCAATGAAAGTAAAGGTCGGTTTACCGGCTGACATGGGATCCGCGTAAGC 811 Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568 || ||||||| | || || ||| ||| | | ||| |||||| || |||| Sbjct 812 GGCGCACCATGGCCCTGTCTTGAGAGCTTGCTCTTGGGCAGAGGAAGAGCGTACAGGTTG 871 Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct 872 CGACCCGAAAGATGGTGAACTATACTTGAGCAGGACGAAGTCAGAGGAAACTCTGATGGA 931 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || | |||||||| ||||||||||||||| | | ||| |||||||||||| Sbjct 932 AGTCCGTATCGGTTCTGACGTGCAAATCGATCGATAGACTTGAGTATAGGGGCGA 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079938567200