Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2741 329 6e-88 seq187 78.8 2e-12 >seq2741 Length=3316 Score = 329 bits (364), Expect = 6e-88 Identities = 254/295 (86%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || ||||||| || | | | | |||| ||||||||||||||||||||||||| Sbjct 2949 TACTGAGATGAATTACTATCGCAACAATCAGTCA-CAGTAGGGTAAAACTAACCTGTCTC 2891 Query 60 ATGA-CGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 | || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2890 ACGAACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGA 2831 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 || ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2830 GA-TTCTGCTTCTCAATGATAGGAAGAGCCGACATCGA-GGATCAAAAAGCAACGTCGCT 2773 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 2772 ATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTAC 2713 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| || | | |||||||||||||||||| ||||| ||| |||| || Sbjct 2712 GTGAAACTTTCACGATTAAAAGGATCGATAGGCCACGCTTTCGCGGTCTGTACTC 2658 >seq187 Length=5864 Score = 78.8 bits (86), Expect = 2e-12 Identities = 79/98 (81%), Gaps = 6/98 (6%) Strand=Plus/Minus Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGAC 255 ||||||||||||| ||||||| |||||||| ||||||| | ||| |||| | | Sbjct 273 AAGCCAGTTATCC-TGTGGTA-CTTTTCTGACACCTCTTACTGAAAACTTTTCAAATCA- 217 Query 256 TAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||||||||||| |||||| ||| ||||||| Sbjct 216 -AAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854375529984