Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq1771 105 1e-20 >seq1771 Length=28509 Score = 105 bits (116), Expect = 1e-20 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||||||||| || |||||||||| || |||||||||||||| |||| ||||| || || Sbjct 5018 GCCCGGTGCTGGTGCTTCTTCCACAACTTTCTGGTGACGACGCTGCATGGAGCAGTCACG 5077 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || | || | || || | |||||| || || | |||||| || | ||| |||||||| Sbjct 5078 TTCAGCAAGATAGAGAGCATTGCCCTGACCATCAGCCAGTACCTGAATTTCAACGTGACG 5137 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 || || ||| | ||||||| ||| ||||| Sbjct 5138 CGGATTCTCAAGGAATTTTTCCATGTAAACCAT 5170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735979579680