Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq2494 304 5e-80 >seq2494 Length=32195 Score = 304 bits (336), Expect = 5e-80 Identities = 417/574 (73%), Gaps = 8/574 (1%) Strand=Plus/Minus Query 13 GGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGACGA 72 |||||| |||||||||| ||||| ||| || || ||||| ||| || || ||| | Sbjct 13016 GGCACGTGAAGTGGCCTG--TTTGGATTTA-GACGCATTCGCGCTGAAGCGACT-GACAA 12961 Query 73 AGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTC 132 | || | ||| ||| | ||||| ||||| |||||| || || || | || ||| | || Sbjct 12960 ACGACT-GCAACTCTGCAATCTGAGCCTT-TTTCTTAGCATTATCTGCCACCAGACGTTC 12903 Query 133 GCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTC 192 |||| ||| || || | ||| ||||| || || || || |||||| | ||||| || Sbjct 12902 ACGGGCCTGAGTTGCTGCCACCATATACTCATCATAATTACCGGGGAACTGACGCAGTTC 12843 Query 193 GCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGA 252 ||||| |||| |||||||| || ||||| || ||||||| ||||| ||||| || || Sbjct 12842 ACCGTAATCCAAATCAGCCATATGAGTACATACTGTGTTCAGAAAGTGGCGGTCATGGGA 12783 Query 253 GATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTT 312 ||||| ||||| ||| |||| |||| | | |||| ||| ||||| || | Sbjct 12782 AATGATAATCATGGTACTGTTGCGCTCATTCAGCACTTGCTCCAACCAACGGATAGTATC 12723 Query 313 GATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGC 372 || |||| || |||||| || || || || ||||| || |||||||| |||||||| || Sbjct 12722 AATATCCAGGTTGTTGGTTGGCTCATCAAGTAACAGAACATCAGGATCAGAAAACAGTGC 12663 Query 373 CTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTG 432 ||| ||||||| ||||||| ||||| ||||| | || |||||| | || |||| Sbjct 12662 CTGAGCCAGCAGGACACGCAATTTCCAACCCGGAGCAACAGTACTCATCAGGCCATAGTG 12603 Query 433 CTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTA 492 |||||| | ||||||||| | |||||| | | || |||||||||| ||| ||| | || Sbjct 12602 CTGCTCTACCGGAATACCAACACCCAGTAATAATTCTCCGGCACGGGCTTCTGCGCTATA 12543 Query 493 GCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCAT-GCCGTCTTCTTCGC 551 ||| ||||| || | | | |||||| || || || | || |||||||||||||| Sbjct 12542 GCCATCCATTTCACCATAAGCAACTTCCAGATCAGCGACA-CGATAGCCGTCTTCTTCGC 12484 Query 552 TCATTTCCGGCAGCGAGTAAATACCATCACGCTC 585 ||||||| | || | ||||||| |||||||| Sbjct 12483 TCATTTCTGCCATAGCATAAATACGGTCACGCTC 12450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881544426944