Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq1771 174 4e-41 >seq1771 Length=28509 Score = 174 bits (192), Expect = 4e-41 Identities = 296/427 (69%), Gaps = 8/427 (2%) Strand=Plus/Minus Query 9 AACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGG 68 || |||||||||||||| || | | || ||||| ||||| || || || ||||| Sbjct 9085 AAGACTTCACGGGCACCAGCACTTTGTGCTGATTCCTTAATGGCCCGGCGTTCAACCTGT 9026 Query 69 GTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCG 128 || | | ||| || || | ||| ||||| ||||| || ||| || ||||| | Sbjct 9025 GTTGCACCGACCGGCACACAAACCAGTACACGCGGGCTTGGGCGCATAAAGCTGTTGTTA 8966 Query 129 TGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACG 188 ||||||| || || || | ||||| ||| || || ||| || || || || || Sbjct 8965 TGAACCTGTTTAATAAAATGCTGCAACATTTTTTCCGTGACATAAAAATCAGCAATAACA 8906 Query 189 CCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTG 248 || |||||||| ||||| ||||| || |||||||| || ||||| || | ||| | || Sbjct 8905 CCATCTTTCATTGGACGGATGGCTGCGATATTGCCCGGAGTACGCCCCAACATCTGTTTT 8846 Query 249 GCCTCGGTGCCGACGGCAACGACACTTTTCTGATTA-----CCATGGGT--CCGAATGGC 301 || || || ||||| | || ||||| || | | || || | || || || Sbjct 8845 GCTTCCAGCCCTACGGCTGCAACGCTTTT-TGGTGAACCGGCCCTGTCTTGTCGGATAGC 8787 Query 302 CACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGC 361 ||||| || || | || || ||| || || | | || ||||||||||| ||||| Sbjct 8786 AACAACAGAGGGTTGATCCAAGACAATTCCCTGACCTTTGACATAAATAAGGGTATTGGC 8727 Query 362 AGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGG 421 ||| |||| ||||||||| | ||| |||||||||||||||| | |||||| ||||| Sbjct 8726 AGTACCCAAGTCAATGGACAAATCATTGGAAAACATGCCACGAAATTTCTTTAACATAAC 8667 Query 422 GAAAGGA 428 ||||||| Sbjct 8666 GAAAGGA 8660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353561232896