Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2741 223 1e-55 seq278 95.1 4e-17 seq187 93.3 1e-16 seq2340 91.5 5e-16 seq2764 89.7 2e-15 seq1051 84.2 7e-14 >seq2741 Length=3316 Score = 223 bits (246), Expect = 1e-55 Identities = 265/352 (75%), Gaps = 18/352 (5%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 2624 CTTTTGCTCTACGTGAGGTTTCCGTCCTCACTGAGCTAGCCTTAGGACACCTGCGTTACG 2565 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||||||||| || | | || Sbjct 2564 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCTTCGGCGAGAGTC 2505 Query 127 GGCCCGCGA--AGGAC------CTTAACGCCA-GAAAATGGTCGGTGAAGACCAGTTCCG 177 | || | ||| ||||| | | ||| | | | | ||| | | ||| Sbjct 2504 ACACGGCCACCAGGTGGCTATGCTTAATTCTACGAAGAGAGGCCG--AAGCCAA--TCCT 2449 Query 178 CT--TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAAC 234 || | | || |||||||| || |||| | || ||||||||||| | ||| ||||| Sbjct 2448 CTGATAACCGAATAAGTAAAGAATCGATGAAAGTGGTGGTATTTCATTGGCGACCGAA-- 2391 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 | ||||||| ||| |||||||||||| | ||||||| ||| ||||||||||||||| Sbjct 2390 GTCTCCCACCTATGCTACACCTCTCATGATTCTTCACAATGTCAAACTAGAGTCAAGCTC 2331 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346 ||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 2330 AACAGGGTCTTCTTTCCCCGCTGTATTTGCCAAGCCCGTTCCCTTGGCTGTG 2279 >seq278 Length=8128 Score = 95.1 bits (104), Expect = 4e-17 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 60 AGTGGCAATCTCGTTAATCCATTCATGCGCGTCCCTAATTAGAGGACGAGGCATTTGGCT 1 Score = 89.7 bits (98), Expect = 2e-15 Identities = 49/49 (100%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6991 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 6943 >seq187 Length=5864 Score = 93.3 bits (102), Expect = 1e-16 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5864 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 5814 >seq2340 Length=7695 Score = 91.5 bits (100), Expect = 5e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 || ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 153 CTTGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCCCT 207 Score = 84.2 bits (92), Expect = 7e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 319 TTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 || |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3 TTTCGCCAAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGATAGTAGATAGGG 53 >seq2764 Length=5693 Score = 89.7 bits (98), Expect = 2e-15 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 |||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 1 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCCCTCAT 54 >seq1051 Length=400 Score = 84.2 bits (92), Expect = 7e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443 || |||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 347 CCCTTCATGCGCGTCCCTAATTAGAGGACGAGGCATTTGGCTACCTTAAGAGAG 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635153167872