Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq2814 224 3e-54 >seq2814 Length=35408 Score = 224 bits (248), Expect = 3e-54 Identities = 476/706 (67%), Gaps = 12/706 (2%) Strand=Plus/Minus Query 38625 GGCTGCATTAACCGATGAAGACACCGAAATCATCTGGTTAGCTTTCGGCAACCCGACGCG 38684 || ||| || || ||||| | || |||||||||||| |||| || || |||||||| || Sbjct 19075 GGGTGCTTTGACAGATGAGAATACAGAAATCATCTGGATAGCGTTTGGTAACCCGACACG 19016 Query 38685 TAATACCGGGCGTTTTCGTGAATGCTTCCGGCG--TTACCGATCGCAGTGGGTCACGCGT 38742 ||| || |||||||| || || || ||||| ||| | ||| ||| || Sbjct 19015 TAACACAGGGCGTTTCCGCGAGTGTTTCCGTAAGTTTAAGCACCGC--TGGAAAACTAAG 18958 Query 38743 CAAATTGATAGCCGCAGCGTGGAAGGGATTAACACCGAGCAAATTGCGGCATGGGAAAAG 38802 || ||||||||||| | || ||||| | |||| || || |||| |||| | Sbjct 18957 CAGATTGATAGCCGTACGGTTGAAGGCACGAACAAAGAACAGATTGATAAATGG---ATT 18901 Query 38803 GAATAC---GGCGAGGACAGCGACTTTTTTAAGGTTCGTGTACGCGGTATTTTCCCTGAC 38859 ||| || |||||||| ||||||||| |||| |||||||| |||||||| ||||| Sbjct 18900 GAAGACCGGGGCGAGGATAGCGACTTTGTTAAAGTTCGTGTGCGCGGTATCTTCCCATCA 18841 Query 38860 GCTTCAGAAATGCAGTTTATTCCTACCGGGTTGACGGAAGAGGCGTTGAAACGCGAGGTG 38919 | || |||| || || || ||||| || || || || | || |||| ||| || Sbjct 18840 ACCTCTGAAACTCAATTCATACCTACTGGCTTAACTGATGCAGCCATGAAGCGCACAGTA 18781 Query 38920 ACGGAAAGGGAGGTCGCGCATGCGCCGGT--TCCTCGGTGTTGACCCGGCGTATTCCGGG 38977 ||| || || || | || || || | || | || |||||||| || || ||||| Sbjct 18780 ACGCAAGCCGAAGTATCACACGCACCAATTATCATAGGCGTTGACCCTGCATACTCCGGT 18721 Query 38978 GCGGATGACGCAGTGATCTATTTGCGGCAGGGGCTTCATTGCAAATTGCTGTGGCGAGGC 39037 | ||||| || || || ||||| || || || || || |||||| |||||| || Sbjct 18720 GATGATGATGCGGTTATTTATTTACGCCAAGGACTGCACAGCAAATGCCTGTGGACGGGT 18661 Query 39038 AGTAAAACCACCGACGATCTGATTATGGCAAAACGCGTCGCGGATTTTGAAGACCAGTAT 39097 | ||||| || |||||| | |||||||||| || | || || | ||| || |||||| Sbjct 18660 AACAAAACTACTGACGATATCGTTATGGCAAAGCGTATTGCTGACTATGAGGATCAGTAT 18601 Query 39098 CACGCCGATGCGGTGTTTATCGATTTCGGCTACGGCACGGGCCTGAAATCCGTCGCAGGC 39157 || || ||||| || |||||| || ||||| || ||||| | | || || | Sbjct 18600 CAGGCTGATGCTGTACATATCGACTTTGGCTATGGTACGGGTATTTATTCTGTTGGTATG 18541 Query 39158 GGCTGGGGTCGGTCGTGGACACTGGTGCCCTTCGGCGGGGCCTCGAGCGATCTGCAAATG 39217 | ||||| || ||| || |||| ||| || || || | || | |||||| Sbjct 18540 AGTTGGGGGCGTGATTGGCAGCTTGTGCAATTCAATGGCGCATCAACTGACCCACAAATG 18481 Query 39218 CTCAACAAACGCGGAGAAATGTACAACAGCGCGAAAACGTGGCTCAAGGAGGGCGGCGCG 39277 | ||||| ||||| |||||||| |||| | || | ||||||||| || || || Sbjct 18480 CAAAACAAGCGCGGTGAAATGTATAACAATGTTAAGTCATGGCTCAAGATAGGTGGGGCT 18421 Query 39278 CTGGATAGGCAGGAAACGGCGGAAGATTTGTCGGCCTGTGAGTACA 39323 | || ||||| || || ||||| || || |||||||| Sbjct 18420 ATTGACGATCAGGATGTTGCAGAGGATTTATCAACCCCTGAGTACA 18375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166791127240832