Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq20 102 3e-19 >seq20 Length=36351 Score = 102 bits (112), Expect = 3e-19 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 ||||| ||| |||||| |||||||||| ||||||| ||||||||| ||| |||| Sbjct 20474 GACAGTAGGAATCTCGTTAATCCATTCGTGCGCGTCGGAAATTACCCGACGAGGCATTTG 20415 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||| || || |||||||| ||||||||||| | ||||||||| Sbjct 20414 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACAAGAGCTTCAATT 20364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702397701760