Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20stercoralis_20[genbank_20GCA_5F000947215.1_202014- 11-13] 800 sequences; 42,674,647 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq101 116 6e-24 >seq101 Length=67252 Score = 116 bits (128), Expect = 6e-24 Identities = 162/219 (74%), Gaps = 11/219 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| | |||| |||||| || ||||| |||||| | Sbjct 32903 GTACAAAGGGCAGGGACGTAATCAATGTAAGCTA-ATGACTTACGTTTACTTGGAATT-C 32846 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG--ATGAAATTTCAAAGAT 118 |||||| | || || ||||||||| || |||| | ||| ||| |||||| | | Sbjct 32845 CTCGTTCATGAAAAATAATTGCAATTTTCACTCCCAGTTACGTAATGT--TTTCAATGTT 32788 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| | || ||| | | | | | | | ||||| |||||||||||||| Sbjct 32787 TACCCATTTATCTCTAAACAGGA-ACATAAT-GATCACTACAT---TGTAGCGCGCGTGC 32733 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | |||||||||||||||||||||||||||| || Sbjct 32732 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATCGC 32694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751994172000