Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20stercoralis_20[genbank_20GCA_5F000947215.1_202014- 11-13] 800 sequences; 42,674,647 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq101 343 3e-92 >seq101 Length=67252 Score = 343 bits (380), Expect = 3e-92 Identities = 234/263 (89%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 34632 TCAACAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 34573 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| Sbjct 34572 TTAGTGGGTGAACAATCCAACGCTTGGCGAAATCTGCTTCGCAATGATAGGAAGAGCCGA 34513 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| Sbjct 34512 CATCGAAGGATCAAAAAGCAACGTCGATATGGACTCTTGGCTGCCACAAGCCAGTTATCC 34453 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||||||||||| ||| | || |||||||||||||| Sbjct 34452 CTGTGGTAACTTTTCTGGCACCTCTTTTTAGAAACATACTAATACAAAAGGATCGATAGG 34393 Query 271 CCACACTTTCATGGTTTGTATTC 293 |||| |||||| ||| ||||||| Sbjct 34392 CCACCCTTTCAGGGTCTGTATTC 34370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854393164800