Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8 176 8e-42 >seq8 Length=1106993 Score = 176 bits (194), Expect = 8e-42 Identities = 197/256 (77%), Gaps = 13/256 (5%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC------TTTGCTCGAATACATTA 126 |||||||||||| ||||||||||| ||||||| ||| | |||| ||||| | Sbjct 167 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATTGTGCTTGAATATTTCG 226 Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183 |||||||||||||||||| || | |||||||||||||||||||| || || || | Sbjct 227 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 285 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||| | | |||||| | |||| || |||||||||||||||| Sbjct 286 TAATGATTAATAGGAACAAACGGGGGCATTCGTATCGCTACGTTAGAGGTGAAATTCTTG 345 Query 244 GATT-TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 || || || ||| ||||||||||||| || ||||| |||||||||||||||| Sbjct 346 GACCGTAGCGA-GACGTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-A 403 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 404 GAACGAAAGTTAGAGG 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915194627776