Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015-
06-02] 587 sequences; 52,178,999 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq8 176 8e-42
>seq8
Length=1106993
Score = 176 bits (194), Expect = 8e-42
Identities = 197/256 (77%), Gaps = 13/256 (5%)
Strand=Plus/Plus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC------TTTGCTCGAATACATTA 126
|||||||||||| ||||||||||| ||||||| ||| | |||| ||||| |
Sbjct 167 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATTGTGCTTGAATATTTCG 226
Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183
|||||||||||||||||| || | |||||||||||||||||||| || || || |
Sbjct 227 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 285
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||| | | |||||| | |||| || ||||||||||||||||
Sbjct 286 TAATGATTAATAGGAACAAACGGGGGCATTCGTATCGCTACGTTAGAGGTGAAATTCTTG 345
Query 244 GATT-TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
|| || || ||| ||||||||||||| || ||||| ||||||||||||||||
Sbjct 346 GACCGTAGCGA-GACGTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-A 403
Query 303 GAACGAAAGTTAGGGG 318
||||||||||||| ||
Sbjct 404 GAACGAAAGTTAGAGG 419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915194627776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |