Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015-
06-02] 587 sequences; 52,178,999 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq415 122 8e-26
>seq415
Length=1542
Score = 122 bits (134), Expect = 8e-26
Identities = 137/181 (76%), Gaps = 8/181 (4%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| || ||||||| ||||||||||||| |||||| ||||| ||||
Sbjct 1040 GGTGGATGCCTTGGCGATCAGAGGCGATGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 1099
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126
|| ||||| ||| | |||||||| |||| ||||||||||| ||||| | ||||
Sbjct 1100 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACTGCTAAGGAG 1159
Query 127 ATATATCATAACG-----CTAGGC--GTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179
||| ||| | | ||| | | |||||||| || ||||||||||||||||||
Sbjct 1160 GTATCGCATGATGAATACATAGTCATGCGAGGCGAACCGGGTGAACTGAAACATCTAAGT 1219
Query 180 A 180
|
Sbjct 1220 A 1220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476797288647
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |