Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq415 122 8e-26 >seq415 Length=1542 Score = 122 bits (134), Expect = 8e-26 Identities = 137/181 (76%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||||||| ||||||||||||| |||||| ||||| |||| Sbjct 1040 GGTGGATGCCTTGGCGATCAGAGGCGATGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 1099 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126 || ||||| ||| | |||||||| |||| ||||||||||| ||||| | |||| Sbjct 1100 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACTGCTAAGGAG 1159 Query 127 ATATATCATAACG-----CTAGGC--GTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179 ||| ||| | | ||| | | |||||||| || |||||||||||||||||| Sbjct 1160 GTATCGCATGATGAATACATAGTCATGCGAGGCGAACCGGGTGAACTGAAACATCTAAGT 1219 Query 180 A 180 | Sbjct 1220 A 1220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476797288647