Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq415 399 7e-109 >seq415 Length=1542 Score = 399 bits (442), Expect = 7e-109 Identities = 293/341 (86%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 29 ACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 88 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG 275 ||||||||||||| ||||||||||| || |||||||||||||||||| ||||||||| Sbjct 89 GAGCGCAACCCTTGTCCTTAGTTGCCAGCAGTAAGTTGGGCACTCTAAGGAGACTGCCGG 148 Query 276 TGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCT 335 |||||||||||||||||||||||| |||||||| |||||||| |||||| | ||||| Sbjct 149 TGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGGCCAGGGCT 208 Query 336 ACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCC 395 |||||||||||||||||| | ||| ||||| || || |||||||| ||| |||||| Sbjct 209 ACACACGTGCTACAATGGCCGGGACAGAGGGCTGCCAACCCGCGAGGGGGAGCTAATCCC 268 Query 396 ATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGC 455 | ||| | || ||| ||||| | |||||||||||||||| ||||| |||||||| Sbjct 269 AGAAACCCGGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGC 328 Query 456 TAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 ||||||||| ||||||||||| ||||||||||||||||| Sbjct 329 TAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCG 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503991171520