Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq415 201 9e-50 >seq415 Length=1542 Score = 201 bits (222), Expect = 9e-50 Identities = 141/161 (88%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| Sbjct 308 TCGAGTTGCAGACTCCGATCCGGACTACGACCGGGTTTCTGGGATTAGCTCCCCCTCGCG 249 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||||||| ||||||||| |||||||| ||||||| |||||| || ||||||||| Sbjct 248 GGTTGGCAGCCCTCTGTCCCGGCCATTGTAGCACGTGTGTAGCCCTGGCCGTAAGGGCCA 189 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 188 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415997634390